Release 2.0.0
Summary
This release upgrades GenMol to the NV-GenMol-89M-v2 checkpoint and updates the NIM documentation, validation matrix, and API contract for the v2 service.
Model and Platform Updates
- Updated the GenMol NIM to version
2.0.0 - Integrated the
NV-GenMol-89M-v2checkpoint - Validated GPU matrix expanded to 13 SKUs:
- Ampere: A10G, A100
- Ada Lovelace: L40S, RTX6000 Ada
- Hopper: H100, H200
- Blackwell: B200, B300, RTX6000 Blackwell
- Grace Hopper: GH200
- Grace Blackwell: GB200, GB300
- DGX Spark: GB10
Generation Quality
- Motif-extension wall-time on H100 improved from 1.82s in v1 to 1.051s in v2 — a reduction of approximately 42%, at comparable scaffold-decoration latency
- Scaffold-decoration validity on H100 improved from 0.967 in v1 to 0.995 in v2
- Higher output diversity on fragment-completion tasks
- Substantially improved success rate on one-step linker design, a v2 capability where v1’s success rate was prohibitively low
For the full per-metric H100 v1 vs v2 comparison (wall-time and accuracy across both benchmark tasks), refer to the Benchmarks page.
API and Runtime Updates
temperaturedefault remains1.0noisedefault is1.0with supported range0.0-2.0step_sizeis deprecated in v2 and is accepted only for backward compatibility- Startup guidance now includes persistent cache mounting for model artifacts
Bug Fixes
- Fixed incorrect version metadata responses for the v2 service
- Fixed plain SMILES request handling
- Fixed under-delivery when invalid generations were filtered out
- Improved uniqueness behavior for generated molecules
- Improved fragment preservation for guided generation
- Mitigated recursion-depth failures under concurrent sustained load by serializing access to the shared in-process model instance
Telemetry Control
NIM Telemetry helps NVIDIA deliver a faster, more reliable experience with greater compatibility across a wide range of environments, while maintaining strict privacy protections and giving users full control.
Benefits:
- Enhances performance and reliability with anonymous system and NIM-level insights that help identify bottlenecks, tune performance across hardware configurations, and improve runtime stability
- Improves compatibility across deployments by helping detect and resolve version, driver, and environment compatibility issues earlier
- Accelerates troubleshooting and bug resolution, enabling faster diagnosis of errors and regressions
- Informs future optimizations and releases using aggregated real-world deployment insights
- Protects user privacy by collecting minimal, anonymous metadata (for example, hardware type and NIM version); user prompts and generated molecule outputs are not collected
- Is fully optional and configurable; telemetry collection is disabled by default
Configuration:
- Set
NIM_TELEMETRY_MODE=0to disable telemetry (default) - Set
NIM_TELEMETRY_MODE=1to enable telemetry
For more information about data privacy, what is collected, and telemetry configuration, refer to: