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Clara Parabricks v4.5.1

Bug Fixes

fq2bam_meth:

  • Fixed crash which occurred when the input FASTQ did not contain read comments.

haplotypecaller:

  • Fixed a hash table overflow in De Bruijn graph.

markdup:

  • Fixed a crash which occurred when the input BAM did not have a read group line. Error will be handled at the start.

  • Fixed correctness issue when the read queryname had non-numeric characters in the colon-delimited end of the name.

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