clara/parabricks/3.7.0/Documentation/ToolDocs/PipelineToolsOverview.html
Tool |
Details |
Run the germline pipeline from FASTQ to VCF using a deep neural network analysis |
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(BETA) Run the de novo mutation pipeline with 3 samples for de novo variant detection |
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Run the germline pipeline from FASTQ to VCF |
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Run the germline pipeline from FASTQ to VCF with correct ploidy values for human sex chromosome handling |
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Run the GATK Best Practices pipeline for RNA-seq data from FASTQ to VCF |
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Run the somatic pipeline from FASTQ to VCF |