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NVIDIA NIM for AlphaFold2 (Latest)
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NVIDIA NIM
AlphaFold2 (Latest)
AlphaFold2 (Latest)
AlphaFold2
Overview
Advantages of NIMs
Prerequisites
Supported Hardware
NGC (NVIDIA GPU Cloud) Account
NGC CLI Tool
Quickstart Guide
Deployment Guide
View available NIM container information
Pull the container image
NIMTools
Docker
NGC SDK
Run the Container
Optional runtime variables and performance tuning
Checking the status of the AlphaFold2 NIM
Killing a running container
Model Checkpoint Caching
AlphaFold2 NIM Endpoints
Usage
Predict structure from an input sequence
Predict MSA from an input sequence
Predict structure from an input MSA
AlphaFold2 NIM Performance
Recommended System Requirements
General Performance Guidelines
Sequence to MSA
MSA to Structure and Sequence to Structure
Configuring the NIM at Runtime
Brief review: starting the AlphaFold2 NIM
Configuring the location of the NIM cache
Using an alternative port for NIM requests
Configuring the number of parallel MSA runners and the number of threads available to each runner
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Last updated on Aug 27, 2024.