morpheus.stages.input.appshield_source_stage.AppShieldSourceStage
- class AppShieldSourceStage(c, input_glob, plugins_include, cols_include, cols_exclude=None, watch_directory=False, max_files=- 1, sort_glob=False, recursive=True, queue_max_size=128, batch_timeout=5.0, encoding='latin1')[source]
Bases:
morpheus.pipeline.preallocator_mixin.PreallocatorMixin
,morpheus.pipeline.single_output_source.SingleOutputSource
Source stage is used to load Appshield messages from one or more plugins into a dataframe. It normalizes nested json messages and arranges them into a dataframe by snapshot and source.
- Parameters
-
c :
morpheus.config.Config
- input_glob
- plugins_include
- cols_include
- cols_exclude
- watch_directory
- max_files
- sort_glob
- recursive
- queue_max_size
- batch_timeout
- encoding
Pipeline configuration instance.
Input glob pattern to match files to read. For example,
/input_dir/<source>/snapshot-*/*.json
would read all files with the ‘json’ extension in the directory input_dir.Plugins for appshield to be extracted.
Raw features to extract from appshield plugins data.
Columns that aren’t essential should be excluded. If
None
, [“SHA256”] will be used.The watch directory option instructs this stage to not close down once all files have been read. Instead it will read all files that match the ‘input_glob’ pattern, and then continue to watch the directory for additional files. Any new files that are added that match the glob will then be processed.
Max number of files to read. Useful for debugging to limit startup time. Default value of -1 is unlimited.
If true the list of files matching
input_glob
will be processed in sorted order.If true, events will be emitted for the files in subdirectories matching
input_glob
.Maximum queue size to hold the file paths to be processed that match
input_glob
.Timeout to retrieve batch messages from the queue.
Encoding to read a file.
-
c :
- Attributes
has_multi_input_ports
has_multi_output_ports
input_count
input_ports
is_built
is_pre_built
name
output_ports
unique_name
Indicates if this stage has multiple input ports.
Indicates if this stage has multiple output ports.
Return None for no max intput count
Input ports to this stage.
Indicates if this stage has been built.
Indicates if this stage has been built.
The name of the stage.
Output ports from this stage.
Unique name of stage.
Methods
batch_source_split
(x, source)Combines plugin dataframes from multiple snapshot and split dataframe per source. build
(builder[, do_propagate])Build this stage. can_build
([check_ports])Determines if all inputs have been built allowing this node to be built. can_pre_build
([check_ports])Determines if all inputs have been built allowing this node to be built. compute_schema
(schema)Compute the schema for this stage based on the incoming schema from upstream stages. files_to_dfs
(x, cols_include, cols_exclude, ...)Load plugin files into a dataframe, then segment the dataframe by source. fill_interested_cols
(plugin_df, cols_include)Fill missing interested plugin columns. get_all_input_stages
()Get all input stages to this stage. get_all_inputs
()Get all input senders to this stage. get_all_output_stages
()Get all output stages from this stage. get_all_outputs
()Get all output receivers from this stage. get_needed_columns
()Stages which need to have columns inserted into the dataframe, should populate the self._needed_columns
dictionary with mapping of column names tomorpheus.common.TypeId
.join
()Awaitable method that stages can implement this to perform cleanup steps when pipeline is stopped. load_df
(filepath, cols_exclude, encoding)Reads a file into a dataframe. load_meta_cols
(filepath_split, plugin, plugin_df)Loads meta columns to dataframe. read_file_to_df
(file, cols_exclude)Read file content to dataframe. set_needed_columns
(needed_columns)Sets the columns needed to perform preallocation. start_async
()This function is called along with on_start during stage initialization. stop
()Stages can implement this to perform cleanup steps when pipeline is stopped. supports_cpp_node
()Specifies whether this Stage is capable of creating C++ nodes. - _build(builder, input_nodes)[source]
This function is responsible for constructing this stage’s internal
mrc.SegmentObject
object. The input of this function contains the returned value from the upstream stage.The input values are the
mrc.Builder
for this stage and a list of parent nodes.- Parameters
-
builder :
mrc.Builder
-
input_nodes :
list[mrc.SegmentObject]
mrc.Builder
object for the pipeline. This should be used to construct/attach the internalmrc.SegmentObject
.List containing the input
mrc.SegmentObject
objects.-
builder :
- Returns
list[mrc.SegmentObject]
List of tuples containing the output
mrc.SegmentObject
object from this stage.
- _build_source(builder)[source]
Abstract method all derived Source classes should implement. Returns the same value as
build
.- Returns
mrc.SegmentObject
:
The MRC node for this stage.
- _build_sources(builder)[source]
Abstract method all derived Source classes should implement. Returns the same value as
build
.- Returns
mrc.SegmentObject
:
The MRC nodes for this stage.
- static batch_source_split(x, source)[source]
Combines plugin dataframes from multiple snapshot and split dataframe per source.
- Parameters
- x
- source
Dataframes from multiple sources.
source column name to group it.
- Returns
- typing.Dict[str, pandas.DataFrame]
Grouped dataframes by source.
- build(builder, do_propagate=True)[source]
Build this stage.
- Parameters
-
builder :
mrc.Builder
- do_propagate
MRC segment for this stage.
Whether to propagate to build output stages, by default True.
-
builder :
- can_build(check_ports=False)[source]
Determines if all inputs have been built allowing this node to be built.
- Parameters
- check_ports
Check if we can build based on the input ports, by default False.
- Returns
- bool
True if we can build, False otherwise.
- can_pre_build(check_ports=False)[source]
Determines if all inputs have been built allowing this node to be built.
- Parameters
- check_ports
Check if we can build based on the input ports, by default False.
- Returns
- bool
True if we can build, False otherwise.
- compute_schema(schema)[source]
Compute the schema for this stage based on the incoming schema from upstream stages.
Incoming schema and type information from upstream stages is available via the
schema.input_schemas
andschema.input_types
properties.Derived classes need to override this method, can set the output type(s) on
schema
by callingset_type
for all output ports. For example a simple pass-thru stage might perform the following:If the port types in
upstream_schema
are incompatible the stage should raise aRuntimeError
.- static files_to_dfs(x, cols_include, cols_exclude, plugins_include, encoding)[source]
Load plugin files into a dataframe, then segment the dataframe by source.
- Parameters
- x
- cols_include
- cols_exclude
- plugins_include: typing.List[str]
- encoding
List of file paths.
Columns that needs to include.
Columns that needs to exclude.
For each path in
x
, a list of plugins to load additional meta cols from.Encoding to read a file.
- Returns
- typing.Dict[str, pandas.DataFrame]
Grouped dataframes by source.
- static fill_interested_cols(plugin_df, cols_include)[source]
Fill missing interested plugin columns.
- Parameters
- plugin_df
- cols_include
Snapshot plugin dataframe
Columns that needs to be included.
- Returns
- pandas.DataFrame
The columns added dataframe.
- get_all_input_stages()[source]
Get all input stages to this stage.
- Returns
- list[
morpheus.pipeline.pipeline.StageBase
]
All input stages.
- list[
- get_all_inputs()[source]
Get all input senders to this stage.
- Returns
- list[
morpheus.pipeline.pipeline.Sender
]
All input senders.
- list[
- get_all_output_stages()[source]
Get all output stages from this stage.
- Returns
- list[
morpheus.pipeline.pipeline.StageBase
]
All output stages.
- list[
- get_all_outputs()[source]
Get all output receivers from this stage.
- Returns
- list[
morpheus.pipeline.pipeline.Receiver
]
All output receivers.
- list[
- get_needed_columns()[source]
Stages which need to have columns inserted into the dataframe, should populate the
self._needed_columns
dictionary with mapping of column names tomorpheus.common.TypeId
. This will ensure that the columns are allocated and populated with null values.- property has_multi_input_ports: bool
Indicates if this stage has multiple input ports.
- Returns
- bool
True if stage has multiple input ports, False otherwise.
- property has_multi_output_ports: bool
Indicates if this stage has multiple output ports.
- Returns
- bool
True if stage has multiple output ports, False otherwise.
- property input_count: int
Return None for no max intput count
- property input_ports: list[morpheus.pipeline.receiver.Receiver]
Input ports to this stage.
- Returns
- list[
morpheus.pipeline.pipeline.Receiver
]
Input ports to this stage.
- list[
- property is_built: bool
Indicates if this stage has been built.
- Returns
- bool
True if stage is built, False otherwise.
- property is_pre_built: bool
Indicates if this stage has been built.
- Returns
- bool
True if stage is built, False otherwise.
- async join()[source]
Awaitable method that stages can implement this to perform cleanup steps when pipeline is stopped. Typically this is called after
stop
during a graceful shutdown, but may not be called if the pipeline is terminated on its own.- static load_df(filepath, cols_exclude, encoding)[source]
Reads a file into a dataframe.
- Parameters
- filepath
- cols_exclude
- encoding
Path to a file.
Columns that needs to exclude.
Encoding to read a file.
- Returns
- pandas.DataFrame
The parsed dataframe.
- Raises
- JSONDecodeError
If not able to decode the json file.
- static load_meta_cols(filepath_split, plugin, plugin_df)[source]
Loads meta columns to dataframe.
- Parameters
- filepath_split
- plugin
- plugin_df: pd.DataFrame
Splits of file path.
Plugin name to which the data belongs to.
DataFrame to which the meta columns will be added to.
- Returns
- pandas.DataFrame
The parsed dataframe.
- property name: str
The name of the stage. Used in logging. Each derived class should override this property with a unique name.
- Returns
- str
Name of a stage.
- property output_ports: list[morpheus.pipeline.sender.Sender]
Output ports from this stage.
- Returns
- list[
morpheus.pipeline.pipeline.Sender
]
Output ports from this stage.
- list[
- static read_file_to_df(file, cols_exclude)[source]
Read file content to dataframe.
- Parameters
-
file :
io.TextIOWrapper
- cols_exclude
Input file object
Dropping columns from a dataframe.
-
file :
- Returns
- pandas.DataFrame
The columns added dataframe
- set_needed_columns(needed_columns)[source]
Sets the columns needed to perform preallocation. This should only be called by the Pipeline at build time. The needed_columns shoudl contain the entire set of columns needed by any other stage in this segment.
- async start_async()[source]
This function is called along with on_start during stage initialization. Allows stages to utilize the asyncio loop if needed.
- stop()[source]
Stages can implement this to perform cleanup steps when pipeline is stopped.
- supports_cpp_node()[source]
Specifies whether this Stage is capable of creating C++ nodes. During the build phase, this value will be combined with
CppConfig.get_should_use_cpp()
to determine whether or not a C++ node is created. This is an instance method to allow runtime decisions and derived classes to override base implementations.- property unique_name: str
Unique name of stage. Generated by appending stage id to stage name.
- Returns
- str
Unique name of stage.